bioinformatics

syllabus

general information

homework

lectures

websites

Will Terzaghi's Homepage

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week 6 websites

http://workbench.sdsc.edu/

http://searchlauncher.bcm.tmc.edu/seq-util/seq-util.html

http://www.firstmarket.com/cutter/cut2.html

http://www.arabidopsis.org/cgi-bin/patmatch/RestrictionMapper.pl

http://biochem.roche.com/fst/products.htm?/benchmate/

Online proteolysis

http://us.expasy.org/tools/peptidecutter/

Finding ORFs Online

http://www.ncbi.nlm.nih.gov/gorf/gorf.html

http://searchlauncher.bcm.tmc.edu/seq-search/gene-search.html

http://www.cbs.dtu.dk/services/NetStart/

Online translation

http://workbench.sdsc.edu/

http://searchlauncher.bcm.tmc.edu/seq-util/seq-util.html

http://www2.ebi.ac.uk/translate/

Designing primers online

http://eatworms.swmed.edu/~tim/primerfinder/

http://workbench.sdsc.edu/

http://searchlauncher.bcm.tmc.edu/seq-util/seq-util.html

http://www-genome.wi.mit.edu/cgi-bin/primer/primer3_www.cgi

http://genome-www2.stanford.edu/cgi-bin/SGD/web-primer/

http://www.biotechlab.northwestern.edu/oligos-design.htm

http://www.med.jhu.edu/medcenter/primer/primer.cgi

Reverse Translation online

http://arbl.cvmbs.colostate.edu/molkit/rtranslate/index.html

BLOCKMAKER

http://searchlauncher.bcm.tmc.edu/multi-align/multi-align.html

http://blocks.fhcrc.org/blocks/

Gene manipulation software for the PC

http://www.cellbiol.com/modules.php?op=modload&name=Downloads&file=index&req=viewsdownload&sid=5